Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921961.1_cds_XP_016470818.1_63226
CDS Infomation

[gene=LOC107793052] [db_xref=GeneID:107793052] [protein=condensin-2 complex subunit H2-like] [protein_id=XP_016470818.1] [location=complement(join(42575..42931,43076..43234,43325..43426,43647..43736,43848..44021,44099..44274,44356..44800,44876..45018,45097..45203,49085..49184,49802..50009))] [gbkey=CDS]
Sequence

ATGATAAACAGTAAAGAAAATGTGAGCGGCCGCGGCGCAGCAGATGAGGAAAATGTAAAA
TTTCACAGTGTTGTACAGCCACTTAGGGATTTAGAATCAAATTGGGGTGTTGATTTAGCC
AAAAATCTTGAAGAATATTTGCTCAAAATTTGCTCTGGTGAAATTACTAGAGATAATTAT
GATGACGGTCATGTGAATTTTGCTGAAGCTGCATTGCTGCTTCAGGGGTCAGTTCAGGTG
TACAGCAGGAAGGTGGAATATCTTTATTCTCTGGTATTGCATTGTTTGGAATTCATTACC
AAGAAGAGTGAACCAGATCTACCAGCAAGTGTATCAGCCCAAGCAGATGAAAACGGGTTG
CCTGCTGCCGATAATGAAGAGAATGATCCATACTGGGTTTCAGAGGAAACCTCAGTGGAA
ACAAAGAACATGTTGGATAATTCGACATGCAGGGATTCTTCATTTACCCAGTTTGTGAAG
GCCCCTGCAAATCTGGTCGTGCGCGAGGCTGACTGCTTGGATGTTACTGGAGATGCTGGA
GAACTAGAGTCTTACCTGCTAGCCACGTGTGATCTTTACCGAGATTTTATTCTGTTGGAC
GCATGCGATGCCGTAACAGTGGATGAGTTTATGAATAATGAGAATATAGCTGGAAAGGGG
CTGAACAATAGCTGCATTGCAGAGGGCCGTTCTTTGGACTCCAAGTGCCACAAGAGCTTT
TCCTCTCCCACAAGACGTTTTGAGGGAACTGGCAATAAGTCTTCAGCTCAAAAGAATCAG
GATGCTAATTTATATCAGTCTCCAGTGTTTCATGAGTTTGGTCCAGGCAATTTTAACAAT
GATCACTTCGCATCTGATATGCCTGATAACATTGATGATGCACATCGATTTGAAGATGGA
TATTCGGAACCTAGAGATTCAGACGACTCAGATGATGAAGACCCATGGAATCCGTTGAAC
CCGCATGAACCTGGCACTTTGAAAGTAAAACCATACAAAAAAGTTAAATCTAATAGAAGG
CAGGGTGCGTTATCCAAAAAAGGTTCATCTTTGGCTACAGAATTTCCAGTTGCGAGATTA
CATGGTACCACTGGCGCAGACCTCAACGACCTGTGGGAAAGAAAATGTTGTGCCATGAAA
AAACAAGGCGACTCGCAATCTCCTCCACCATATGAGAAGCTACGGGAATCACTTCTTCAT
GGGGAGAACAACGATTATGATGTTTTGAATAGTCCAACGGAAAAAAATGAAAATGATTAC
TATGATAGTGCAGATCACGATTTTGGGCCTTCTGGCTTTGACATGCCAGAAAATGCAGAC
ATGAACAGCGATGCAACTCCATTTGGTGAAAAGCATGATAAATGTAGTCCATTTTTTGAC
AGTGAAGCTCATGAAGATTCGAATGCTCATGCCAACCTTGAAGATCTTTGTCGCTCCCAC
TTGGATTCTCTTCTTGCTAGCTTTGCTGAAAGTGAAAAGCAGAGTGAATTGGCTGCTCGG
GTTTCAACGTGGAAACAGAGAATTGAGCTTAACTTGGAGGAACAAGACTCACATCCCCCC
TTTGACATTCATGAATATGGGGCTAGGATTTTGTGCAAGTTATCCCTGGAAGAAAATGGT
CAAAGCACCAAGTCTTTTTCTGATGTTGTTACGGGTCAAGAGAAGCATGATATTGCTCGA
ACATTTTCTGCGCTTCTGCAATTGGTAAACAACGGAGATGTTGGTTTGGAAAGAGGTGGA
ATACGTGAGTCCACTTGTTACACAGCTGCAAATCCCTTCTATGTCCGACTCCTTAAGAAT
GATAATGGTAGGGAGAAAATTCAAATTCGATCATCAAAAAAGAGAGCAAAATCTCCAATA
CCAAATCAGGGCTTTAGAAAGGAAAAAAACAAAGGTAAAGAAATTCAGGCTGCTTTTGGT
TCCTCACCTTCAGAACCCAATTCAGCTTGCGGATTTGCCCTGAAGCTGGGAAAGGTTAAT
GGAACTCGTTGCACGCCTGAAGGTAAGAAAAGAAGGAAATCCAGATTAGTCGTACCACCA
GATATACGTACTGCATTGTGA

Peptide Sequence

PEP ID

XP_016470818.1
PEP Infomation

PREDICTED: condensin-2 complex subunit H2-like [Nicotiana tabacum]
Sequence

MINSKENVSGRGAADEENVKFHSVVQPLRDLESNWGVDLAKNLEEYLLKICSGEITRDNY
DDGHVNFAEAALLLQGSVQVYSRKVEYLYSLVLHCLEFITKKSEPDLPASVSAQADENGL
PAADNEENDPYWVSEETSVETKNMLDNSTCRDSSFTQFVKAPANLVVREADCLDVTGDAG
ELESYLLATCDLYRDFILLDACDAVTVDEFMNNENIAGKGLNNSCIAEGRSLDSKCHKSF
SSPTRRFEGTGNKSSAQKNQDANLYQSPVFHEFGPGNFNNDHFASDMPDNIDDAHRFEDG
YSEPRDSDDSDDEDPWNPLNPHEPGTLKVKPYKKVKSNRRQGALSKKGSSLATEFPVARL
HGTTGADLNDLWERKCCAMKKQGDSQSPPPYEKLRESLLHGENNDYDVLNSPTEKNENDY
YDSADHDFGPSGFDMPENADMNSDATPFGEKHDKCSPFFDSEAHEDSNAHANLEDLCRSH
LDSLLASFAESEKQSELAARVSTWKQRIELNLEEQDSHPPFDIHEYGARILCKLSLEENG
QSTKSFSDVVTGQEKHDIARTFSALLQLVNNGDVGLERGGIRESTCYTAANPFYVRLLKN
DNGREKIQIRSSKKRAKSPIPNQGFRKEKNKGKEIQAAFGSSPSEPNSACGFALKLGKVN
GTRCTPEGKKRRKSRLVVPPDIRTAL

Transcript Sequence

Gene sequence data has not been registered.